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On September 14, 2026, 12:25:17 PM UTC, default:
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Changed the version of Analysis of a coastal North Sea fish community: comparison of aquatic environmental DNA concentrations to fish catches to 15 (previously 1)
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Uploaded a new file to resource DescriptionOfFiles.txt in Analysis of a coastal North Sea fish community: comparison of aquatic environmental DNA concentrations to fish catches
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Uploaded a new file to resource utils.R in Analysis of a coastal North Sea fish community: comparison of aquatic environmental DNA concentrations to fish catches
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Uploaded a new file to resource 12Sfish_20180320_aligned.fa in Analysis of a coastal North Sea fish community: comparison of aquatic environmental DNA concentrations to fish catches
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Uploaded a new file to resource Mapping_NIOZ_51.txt in Analysis of a coastal North Sea fish community: comparison of aquatic environmental DNA concentrations to fish catches
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Uploaded a new file to resource vis12S_NIOZ_eDNA.ARF in Analysis of a coastal North Sea fish community: comparison of aquatic environmental DNA concentrations to fish catches
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Uploaded a new file to resource generate_OTUs.sh in Analysis of a coastal North Sea fish community: comparison of aquatic environmental DNA concentrations to fish catches
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Uploaded a new file to resource Mapping_NIOZ_47.txt in Analysis of a coastal North Sea fish community: comparison of aquatic environmental DNA concentrations to fish catches
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Uploaded a new file to resource vis12S_NIOZ_eDNA.arb in Analysis of a coastal North Sea fish community: comparison of aquatic environmental DNA concentrations to fish catches
| f | 1 | { | f | 1 | { |
| 2 | "author": null, | 2 | "author": null, | ||
| 3 | "author_email": null, | 3 | "author_email": null, | ||
| 4 | "code": "7b.b.w", | 4 | "code": "7b.b.w", | ||
| 5 | "contributor": "NIOZ Royal Netherlands Institute for Sea Research", | 5 | "contributor": "NIOZ Royal Netherlands Institute for Sea Research", | ||
| 6 | "creator_user_id": "8e2a21a2-2063-4539-921d-c12aea85ff6c", | 6 | "creator_user_id": "8e2a21a2-2063-4539-921d-c12aea85ff6c", | ||
| 7 | "creators": "[{\"firstname\":\"Judith\",\"lastname\":\"van | 7 | "creators": "[{\"firstname\":\"Judith\",\"lastname\":\"van | ||
| 8 | Bleijswijk\",\"affiliation\":\"Royal Netherlands Institute for Sea | 8 | Bleijswijk\",\"affiliation\":\"Royal Netherlands Institute for Sea | ||
| 9 | swijk@nioz.nl\",\"iscorrespondingauthor\":true},{\"firstname\":\"Julia | 9 | swijk@nioz.nl\",\"iscorrespondingauthor\":true},{\"firstname\":\"Julia | ||
| 10 | C. \",\"lastname\":\"Engelmann\",\"affiliation\":\"Royal Netherlands | 10 | C. \",\"lastname\":\"Engelmann\",\"affiliation\":\"Royal Netherlands | ||
| 11 | Institute for Sea Research | 11 | Institute for Sea Research | ||
| 12 | "firstname\":\"Lise\",\"lastname\":\"Klunder\",\"affiliation\":\"Royal | 12 | "firstname\":\"Lise\",\"lastname\":\"Klunder\",\"affiliation\":\"Royal | ||
| 13 | Netherlands Institute for Sea | 13 | Netherlands Institute for Sea | ||
| 14 | \"firstname\":\"Harry\",\"lastname\":\"Witte\",\"affiliation\":\"Royal | 14 | \"firstname\":\"Harry\",\"lastname\":\"Witte\",\"affiliation\":\"Royal | ||
| 15 | Netherlands Institute for Sea | 15 | Netherlands Institute for Sea | ||
| 16 | ress\":\"\",\"iscorrespondingauthor\":false},{\"firstname\":\"Johannes | 16 | ress\":\"\",\"iscorrespondingauthor\":false},{\"firstname\":\"Johannes | ||
| 17 | IJ.\",\"lastname\":\"Witte\",\"affiliation\":\"Royal Netherlands | 17 | IJ.\",\"lastname\":\"Witte\",\"affiliation\":\"Royal Netherlands | ||
| 18 | Institute for Sea | 18 | Institute for Sea | ||
| 19 | laddress\":\"\",\"iscorrespondingauthor\":false},{\"firstname\":\"Henk | 19 | laddress\":\"\",\"iscorrespondingauthor\":false},{\"firstname\":\"Henk | ||
| 20 | W.\",\"lastname\":\"van der Veer\",\"affiliation\":\"Royal Netherlands | 20 | W.\",\"lastname\":\"van der Veer\",\"affiliation\":\"Royal Netherlands | ||
| 21 | Institute for Sea | 21 | Institute for Sea | ||
| 22 | 61X\",\"contactemailaddress\":\"\",\"iscorrespondingauthor\":false}]", | 22 | 61X\",\"contactemailaddress\":\"\",\"iscorrespondingauthor\":false}]", | ||
| 23 | "dataset_persistent_id": "DOI:10.25850/nioz/7b.b.w", | 23 | "dataset_persistent_id": "DOI:10.25850/nioz/7b.b.w", | ||
| 24 | "dates": | 24 | "dates": | ||
| 25 | -09-09T22:00:00.000Z\",\"type\":\"collected\",\"information\":\"\"}]", | 25 | -09-09T22:00:00.000Z\",\"type\":\"collected\",\"information\":\"\"}]", | ||
| 26 | "deposit_date": "2019-12-18", | 26 | "deposit_date": "2019-12-18", | ||
| 27 | "depositor": "Judith Bleijswijk van", | 27 | "depositor": "Judith Bleijswijk van", | ||
| 28 | "distribution_date": "2019-12-18", | 28 | "distribution_date": "2019-12-18", | ||
| 29 | "distributor": "Research Data Management(NIOZ Royal Netherlands | 29 | "distributor": "Research Data Management(NIOZ Royal Netherlands | ||
| 30 | Institute for Sea Research)", | 30 | Institute for Sea Research)", | ||
| 31 | "doi_date_published": "2020-02-06", | 31 | "doi_date_published": "2020-02-06", | ||
| 32 | "funding_references": "[{\"name\":\"NWO basic | 32 | "funding_references": "[{\"name\":\"NWO basic | ||
| 33 | funding\",\"awardnumber\":\"\",\"awardtitle\":\"\"}]", | 33 | funding\",\"awardnumber\":\"\",\"awardtitle\":\"\"}]", | ||
| 34 | "geographic_coverage": "[{\"place\":\"Western Wadden | 34 | "geographic_coverage": "[{\"place\":\"Western Wadden | ||
| 35 | \"\",\"longitude_1\":\"\",\"latitude_2\":\"\",\"longitude_2\":\"\"}]", | 35 | \"\",\"longitude_1\":\"\",\"latitude_2\":\"\",\"longitude_2\":\"\"}]", | ||
| 36 | "groups": [], | 36 | "groups": [], | ||
| 37 | "id": "0da357f3-8226-4370-9805-f1713e8832cf", | 37 | "id": "0da357f3-8226-4370-9805-f1713e8832cf", | ||
| 38 | "isopen": true, | 38 | "isopen": true, | ||
| 39 | "license_id": "CC0-1.0", | 39 | "license_id": "CC0-1.0", | ||
| 40 | "license_title": "CC0 1.0", | 40 | "license_title": "CC0 1.0", | ||
| 41 | "license_url": "https://creativecommons.org/publicdomain/zero/1.0/", | 41 | "license_url": "https://creativecommons.org/publicdomain/zero/1.0/", | ||
| 42 | "maintainer": null, | 42 | "maintainer": null, | ||
| 43 | "maintainer_email": null, | 43 | "maintainer_email": null, | ||
| 44 | "metadata_created": "2024-10-22T09:41:15.433205", | 44 | "metadata_created": "2024-10-22T09:41:15.433205", | ||
| n | 45 | "metadata_modified": "2024-10-22T20:28:39.724537", | n | 45 | "metadata_modified": "2026-09-14T12:25:17.778584", |
| 46 | "name": "7bbw", | 46 | "name": "7bbw", | ||
| 47 | "notes": "Analyses of environmental DNA has the potential to become | 47 | "notes": "Analyses of environmental DNA has the potential to become | ||
| 48 | an integrated tool in fish research and management. We performed a | 48 | an integrated tool in fish research and management. We performed a | ||
| 49 | pilot study during the spring migration of fishes from the North Sea | 49 | pilot study during the spring migration of fishes from the North Sea | ||
| 50 | into the Wadden Sea and present comparative results from daily fyke | 50 | into the Wadden Sea and present comparative results from daily fyke | ||
| 51 | catches (20 mm mesh) in the Marsdiep tidal inlet on two locations and | 51 | catches (20 mm mesh) in the Marsdiep tidal inlet on two locations and | ||
| 52 | results from weekly fish eDNA analyses on three locations, all within | 52 | results from weekly fish eDNA analyses on three locations, all within | ||
| 53 | 2 km distance. \nFish catches did not differ significantly between the | 53 | 2 km distance. \nFish catches did not differ significantly between the | ||
| 54 | two locations, whereas the eDNA composition showed a significant | 54 | two locations, whereas the eDNA composition showed a significant | ||
| 55 | location effect. However, when eDNA analysis was restricted to species | 55 | location effect. However, when eDNA analysis was restricted to species | ||
| 56 | that were caught with the fykes, differences among locations became | 56 | that were caught with the fykes, differences among locations became | ||
| 57 | insignificant. Over ten weeks, from late April to early July, | 57 | insignificant. Over ten weeks, from late April to early July, | ||
| 58 | presence-absence calls of fishes based on weekly eDNA sampling | 58 | presence-absence calls of fishes based on weekly eDNA sampling | ||
| 59 | significantly agreed with calls based on seven days of fyke fishing 1 | 59 | significantly agreed with calls based on seven days of fyke fishing 1 | ||
| 60 | km westwards. Fish eDNA compositions differed significantly among | 60 | km westwards. Fish eDNA compositions differed significantly among | ||
| 61 | sample days and months but not between tides. Over the season, | 61 | sample days and months but not between tides. Over the season, | ||
| 62 | patterns in eDNA concentration (12S rRNA gene copies/L) inferred from | 62 | patterns in eDNA concentration (12S rRNA gene copies/L) inferred from | ||
| 63 | quantitative PCR and Illumina HiSeq community composition, | 63 | quantitative PCR and Illumina HiSeq community composition, | ||
| 64 | corresponded to patterns in wet mass for the eight most abundant fish | 64 | corresponded to patterns in wet mass for the eight most abundant fish | ||
| 65 | species in the fyke (>6 weeks present) despite changes in water | 65 | species in the fyke (>6 weeks present) despite changes in water | ||
| 66 | temperature and changes in fish size class. Small sandeel and gobies, | 66 | temperature and changes in fish size class. Small sandeel and gobies, | ||
| 67 | which are important prey for large fishes and birds, were typically | 67 | which are important prey for large fishes and birds, were typically | ||
| 68 | missed with the fyke but contributed up to 25-40% of the fish eDNA | 68 | missed with the fyke but contributed up to 25-40% of the fish eDNA | ||
| 69 | depending on the sample location.", | 69 | depending on the sample location.", | ||
| 70 | "num_resources": 12, | 70 | "num_resources": 12, | ||
| 71 | "num_tags": 8, | 71 | "num_tags": 8, | ||
| 72 | "organization": { | 72 | "organization": { | ||
| 73 | "approval_status": "approved", | 73 | "approval_status": "approved", | ||
| 74 | "created": "2024-10-22T06:06:56.074257", | 74 | "created": "2024-10-22T06:06:56.074257", | ||
| 75 | "description": "", | 75 | "description": "", | ||
| 76 | "id": "bed2a893-3895-450b-bf4b-c74318003b1b", | 76 | "id": "bed2a893-3895-450b-bf4b-c74318003b1b", | ||
| n | 77 | "image_url": | n | 77 | "image_url": "https://doi.nioz.nl/NIOZ.svg", |
| 78 | z.nl/application/files/1216/8924/5333/NIOZ-logo_witte_randi-2023.svg", | ||||
| 79 | "is_organization": true, | 78 | "is_organization": true, | ||
| 80 | "name": "nioz", | 79 | "name": "nioz", | ||
| 81 | "state": "active", | 80 | "state": "active", | ||
| 82 | "title": "Royal Netherlands Institute for Sea Research", | 81 | "title": "Royal Netherlands Institute for Sea Research", | ||
| 83 | "type": "organization" | 82 | "type": "organization" | ||
| 84 | }, | 83 | }, | ||
| 85 | "owner_org": "bed2a893-3895-450b-bf4b-c74318003b1b", | 84 | "owner_org": "bed2a893-3895-450b-bf4b-c74318003b1b", | ||
| 86 | "private": false, | 85 | "private": false, | ||
| 87 | "production_date": "2020-02-06", | 86 | "production_date": "2020-02-06", | ||
| 88 | "relationships_as_object": [], | 87 | "relationships_as_object": [], | ||
| 89 | "relationships_as_subject": [], | 88 | "relationships_as_subject": [], | ||
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