Changes
On June 16, 2026, 9:07:35 AM UTC,
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Added resource Ind_1_FIBSEM_20240422_114007.zip to Cryo-FIB-SEM Foraminifera
| f | 1 | { | f | 1 | { |
| 2 | "author": "Daniel Francois (Royal Netherlands Institute for Sea | 2 | "author": "Daniel Francois (Royal Netherlands Institute for Sea | ||
| 3 | Research)", | 3 | Research)", | ||
| 4 | "author_email": "daniel.do.nascimento.silva@nioz.nl", | 4 | "author_email": "daniel.do.nascimento.silva@nioz.nl", | ||
| 5 | "code": "7b.b.xk", | 5 | "code": "7b.b.xk", | ||
| 6 | "contributor": "Royal Netherlands Institute for Sea Research | 6 | "contributor": "Royal Netherlands Institute for Sea Research | ||
| 7 | (NIOZ)", | 7 | (NIOZ)", | ||
| 8 | "creator_user_id": "d2baecfe-8752-4dab-a4fb-58c26224340e", | 8 | "creator_user_id": "d2baecfe-8752-4dab-a4fb-58c26224340e", | ||
| 9 | "creators": "[{\"firstname\":\"Daniel\",\"lastname\":\" | 9 | "creators": "[{\"firstname\":\"Daniel\",\"lastname\":\" | ||
| 10 | Francois\",\"orcid\":\"0000-0003-0173-6936\",\"affiliation\":\"Royal | 10 | Francois\",\"orcid\":\"0000-0003-0173-6936\",\"affiliation\":\"Royal | ||
| 11 | Netherlands Institute for Sea | 11 | Netherlands Institute for Sea | ||
| 12 | ddress\":\"daniel.do.nascimento.silva@nioz.nl\",\"formatted\":\"Daniel | 12 | ddress\":\"daniel.do.nascimento.silva@nioz.nl\",\"formatted\":\"Daniel | ||
| 13 | Francois - Royal Netherlands Institute for Sea Research - ORCID: | 13 | Francois - Royal Netherlands Institute for Sea Research - ORCID: | ||
| 14 | 0000-0003-0173-6936 - Corresponding Author - | 14 | 0000-0003-0173-6936 - Corresponding Author - | ||
| 15 | daniel.do.nascimento.silva@nioz.nl\"}]", | 15 | daniel.do.nascimento.silva@nioz.nl\"}]", | ||
| 16 | "dataset_persistent_id": "DOI:10.25850/nioz/7b.b.xk", | 16 | "dataset_persistent_id": "DOI:10.25850/nioz/7b.b.xk", | ||
| 17 | "deposit_date": "2026-06-16", | 17 | "deposit_date": "2026-06-16", | ||
| 18 | "depositor": "Daniel do Nascimento Silva | 18 | "depositor": "Daniel do Nascimento Silva | ||
| 19 | (daniel.do.nascimento.silva@nioz.nl)", | 19 | (daniel.do.nascimento.silva@nioz.nl)", | ||
| 20 | "distribution_date": "2026-06-16", | 20 | "distribution_date": "2026-06-16", | ||
| 21 | "distributor": "Research Data Management(NIOZ Royal Netherlands | 21 | "distributor": "Research Data Management(NIOZ Royal Netherlands | ||
| 22 | Institute for Sea Research)", | 22 | Institute for Sea Research)", | ||
| 23 | "doi_date_published": "2026-06-16T10:53:20.0085662", | 23 | "doi_date_published": "2026-06-16T10:53:20.0085662", | ||
| 24 | "groups": [], | 24 | "groups": [], | ||
| 25 | "id": "7cc2fea8-2e2b-49cc-b20e-5eb149deab73", | 25 | "id": "7cc2fea8-2e2b-49cc-b20e-5eb149deab73", | ||
| 26 | "isopen": false, | 26 | "isopen": false, | ||
| 27 | "license_title": null, | 27 | "license_title": null, | ||
| 28 | "maintainer": "Daniel", | 28 | "maintainer": "Daniel", | ||
| 29 | "maintainer_email": "daniel.do.nascimento.silva@nioz.nl", | 29 | "maintainer_email": "daniel.do.nascimento.silva@nioz.nl", | ||
| 30 | "metadata_created": "2026-06-16T08:53:37.970589", | 30 | "metadata_created": "2026-06-16T08:53:37.970589", | ||
| n | 31 | "metadata_modified": "2026-06-16T08:53:37.970596", | n | 31 | "metadata_modified": "2026-06-16T09:07:35.733477", |
| 32 | "name": "cryo-fib-sem-foraminifera", | 32 | "name": "cryo-fib-sem-foraminifera", | ||
| 33 | "notes": "Geochemical signatures of the calcium carbonate shells of | 33 | "notes": "Geochemical signatures of the calcium carbonate shells of | ||
| 34 | foraminifera form the basis of many proxies used in climate | 34 | foraminifera form the basis of many proxies used in climate | ||
| 35 | reconstructions. Yet, key physiological controls governing mineral | 35 | reconstructions. Yet, key physiological controls governing mineral | ||
| 36 | precipitation remain unknown, limiting a mechanistic understanding of | 36 | precipitation remain unknown, limiting a mechanistic understanding of | ||
| 37 | proxy sensitivity and interspecific variability. Here, we combine | 37 | proxy sensitivity and interspecific variability. Here, we combine | ||
| 38 | cryo\u2013focused ion beam milling with scanning electron microscopy | 38 | cryo\u2013focused ion beam milling with scanning electron microscopy | ||
| 39 | to reconstruct the in vivo three-dimensional ultrastructure of the | 39 | to reconstruct the in vivo three-dimensional ultrastructure of the | ||
| 40 | foraminiferal calcification site. The images reveal a semi-open | 40 | foraminiferal calcification site. The images reveal a semi-open | ||
| 41 | system, in which the calcifying fluid is largely isolated from ambient | 41 | system, in which the calcifying fluid is largely isolated from ambient | ||
| 42 | seawater by a thin cellular barrier, while discrete ~30 nm openings | 42 | seawater by a thin cellular barrier, while discrete ~30 nm openings | ||
| 43 | allow limited fluid exchange. This configuration provides a link | 43 | allow limited fluid exchange. This configuration provides a link | ||
| 44 | between seawater and the site of calcification, offering a mechanistic | 44 | between seawater and the site of calcification, offering a mechanistic | ||
| 45 | explanation for the correlation between shell trace-element ratios and | 45 | explanation for the correlation between shell trace-element ratios and | ||
| 46 | ambient seawater composition, complementing the ion uptake through | 46 | ambient seawater composition, complementing the ion uptake through | ||
| 47 | transmembrane transport. This, in turn, improves understanding of | 47 | transmembrane transport. This, in turn, improves understanding of | ||
| 48 | element incorporation and enhances the reliability of foraminiferal | 48 | element incorporation and enhances the reliability of foraminiferal | ||
| 49 | calcite as a paleoproxy.", | 49 | calcite as a paleoproxy.", | ||
| n | 50 | "num_resources": 0, | n | 50 | "num_resources": 1, |
| 51 | "num_tags": 3, | 51 | "num_tags": 3, | ||
| 52 | "organization": { | 52 | "organization": { | ||
| 53 | "approval_status": "approved", | 53 | "approval_status": "approved", | ||
| 54 | "created": "2024-10-22T06:06:56.074257", | 54 | "created": "2024-10-22T06:06:56.074257", | ||
| 55 | "description": "", | 55 | "description": "", | ||
| 56 | "id": "bed2a893-3895-450b-bf4b-c74318003b1b", | 56 | "id": "bed2a893-3895-450b-bf4b-c74318003b1b", | ||
| 57 | "image_url": | 57 | "image_url": | ||
| 58 | z.nl/application/files/1216/8924/5333/NIOZ-logo_witte_randi-2023.svg", | 58 | z.nl/application/files/1216/8924/5333/NIOZ-logo_witte_randi-2023.svg", | ||
| 59 | "is_organization": true, | 59 | "is_organization": true, | ||
| 60 | "name": "nioz", | 60 | "name": "nioz", | ||
| 61 | "state": "active", | 61 | "state": "active", | ||
| 62 | "title": "Royal Netherlands Institute for Sea Research", | 62 | "title": "Royal Netherlands Institute for Sea Research", | ||
| 63 | "type": "organization" | 63 | "type": "organization" | ||
| 64 | }, | 64 | }, | ||
| 65 | "owner_org": "bed2a893-3895-450b-bf4b-c74318003b1b", | 65 | "owner_org": "bed2a893-3895-450b-bf4b-c74318003b1b", | ||
| 66 | "private": false, | 66 | "private": false, | ||
| 67 | "production_date": "2026-06-16", | 67 | "production_date": "2026-06-16", | ||
| 68 | "relationships_as_object": [], | 68 | "relationships_as_object": [], | ||
| 69 | "relationships_as_subject": [], | 69 | "relationships_as_subject": [], | ||
| t | 70 | "resources": [], | t | 70 | "resources": [ |
| 71 | { | ||||
| 72 | "cache_last_updated": null, | ||||
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| 74 | "created": "2026-06-16T09:07:35.760240", | ||||
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| 76 | "format": "ZIP", | ||||
| 77 | "hash": "", | ||||
| 78 | "id": "21c60f3e-e0cc-453f-ab89-0273f327dbf7", | ||||
| 79 | "last_modified": "2026-06-16T09:07:35.719304", | ||||
| 80 | "metadata_modified": "2026-06-16T09:07:35.745891", | ||||
| 81 | "mimetype": "application/zip", | ||||
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| 83 | "name": "Ind_1_FIBSEM_20240422_114007.zip", | ||||
| 84 | "package_id": "7cc2fea8-2e2b-49cc-b20e-5eb149deab73", | ||||
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| 88 | "state": "active", | ||||
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| 90 | 0cc-453f-ab89-0273f327dbf7/download/ind_1_fibsem_20240422_114007.zip", | ||||
| 91 | "url_type": "upload" | ||||
| 92 | } | ||||
| 93 | ], | ||||
| 71 | "state": "active", | 94 | "state": "active", | ||
| 72 | "subject": "Earth and Environmental Sciences", | 95 | "subject": "Earth and Environmental Sciences", | ||
| 73 | "tags": [ | 96 | "tags": [ | ||
| 74 | { | 97 | { | ||
| 75 | "display_name": "biomineralisation", | 98 | "display_name": "biomineralisation", | ||
| 76 | "id": "e1460045-c8a5-4c15-8726-e0263b9744b7", | 99 | "id": "e1460045-c8a5-4c15-8726-e0263b9744b7", | ||
| 77 | "name": "biomineralisation", | 100 | "name": "biomineralisation", | ||
| 78 | "state": "active", | 101 | "state": "active", | ||
| 79 | "vocabulary_id": null | 102 | "vocabulary_id": null | ||
| 80 | }, | 103 | }, | ||
| 81 | { | 104 | { | ||
| 82 | "display_name": "cryo-fib-sem", | 105 | "display_name": "cryo-fib-sem", | ||
| 83 | "id": "d47cf09f-7c2c-4e3d-b0c8-f81018ad9901", | 106 | "id": "d47cf09f-7c2c-4e3d-b0c8-f81018ad9901", | ||
| 84 | "name": "cryo-fib-sem", | 107 | "name": "cryo-fib-sem", | ||
| 85 | "state": "active", | 108 | "state": "active", | ||
| 86 | "vocabulary_id": null | 109 | "vocabulary_id": null | ||
| 87 | }, | 110 | }, | ||
| 88 | { | 111 | { | ||
| 89 | "display_name": "foraminifera", | 112 | "display_name": "foraminifera", | ||
| 90 | "id": "9f1bacbc-ced2-4e04-a09e-4bb576210e68", | 113 | "id": "9f1bacbc-ced2-4e04-a09e-4bb576210e68", | ||
| 91 | "name": "foraminifera", | 114 | "name": "foraminifera", | ||
| 92 | "state": "active", | 115 | "state": "active", | ||
| 93 | "vocabulary_id": null | 116 | "vocabulary_id": null | ||
| 94 | } | 117 | } | ||
| 95 | ], | 118 | ], | ||
| 96 | "title": "Cryo-FIB-SEM Foraminifera", | 119 | "title": "Cryo-FIB-SEM Foraminifera", | ||
| 97 | "type": "dataset", | 120 | "type": "dataset", | ||
| 98 | "url": "https://doi.org/10.25850/nioz/7b.b.xk", | 121 | "url": "https://doi.org/10.25850/nioz/7b.b.xk", | ||
| 99 | "version": "1" | 122 | "version": "1" | ||
| 100 | } | 123 | } |